1,020 B
1,020 B
STADEN-LG
STADEN Last Generation
Introduction
This pkg is a fork of STADEN 1993 v12.1. Currently, I fixed the bug for compiling, but not completely.
Build
You should clone this repo and cd to the repo get the $pkgname
via pwd
# build easy
for pkgalone in ted newted abi alf Misc cop convert expGetSeq frog getMCH indexseqlibs bap/osp-bits
do
cd $pkgname/src/$pkgalone
make
done
# compile x related
cd $pkgname/src/staden
bash gen_a.sh
make mep dap sap splitp1 splitp2 splitp3 gip sethelp convert_project sapf nipf xmep xdap xsap
cd $pkgname/src/bap
make bap xbap
for pkgalone in vepe update_subclones scf
do
cd $pkgname/src/$pkgalone
make
done
Or you can get this pkg from BioArchLinux repo.
Todo
Following pkgs need your hands.
-
nip
-
sip
-
rep
-
lip
-
vep
-
nipl
-
pipl
-
sipl
-
xnip
-
xpip
-
xsip
License
-
Copyright (c) 1993 MEDICAL RESEARCH COUNCIL (MRC), UK. BSD License.
-
Copyright (c) 2023~ Everyone. GPL License.