TNT_Script/README.md

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2023-02-26 02:42:56 +08:00
# TNT Script used by Guoyi
This scripts are followed MIT except for setk.run which belongs to Salvador Arias(Instituto Miguel Lillo, San Miguel de Tucumán, Argentina).
## tnt.run
- `file.tnt` must be changed to your own file;
- `trees.tre`, `bt.tre` are trees with taxaname;
- `trees_no.tre`, `bt_no.tre` are trees without taxaname which can be put into Winclada with the `file.tnt`;
- `majority` can be replaced by `nelsen`;
- `boot` can be replaced by `jack`;
## setk_tnt.run
- `file.tnt` must be changed to your own file;
- You can find the recommended k from `setk.log` and then change in `piwe=` `tnt.run`;