malacology/TNT_Script
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  • 0.1.6 561f88be60

    0.1.6 Stable

    malacology released this 2025-04-05 15:04:33 +08:00 | 2 commits to main since this release

    guoyi.run

    • polish: just add warn to polytomy
    Downloads
  • 0.1.5 6c05ec1de7

    0.1.5 Stable

    malacology released this 2025-04-05 13:46:41 +08:00 | 3 commits to main since this release

    guoyi.run

    • fix: bremer-related calculation for polytomy
    Downloads
  • 0.1.4 ec4fe0222b

    0.1.4 Stable

    malacology released this 2025-04-05 12:25:42 +08:00 | 5 commits to main since this release

    guoyi.run

    • add: original svg file

    • fix: bremer-related topology

    Downloads
  • 0.1.3 e1154cb7c5

    0.1.3 Stable

    malacology released this 2025-03-01 20:58:03 +08:00 | 7 commits to main since this release

    guoyi.run

    • polish: handle cases where the denominator is zero.
    Downloads
  • 0.1.2 28292a5a74

    0.1.2 Stable

    malacology released this 2024-01-15 20:23:49 +08:00 | 10 commits to main since this release

    tnt2figtree

    • add: tnt2figtree which can convert the tree(s) generated by export from TNT to the nexus format (FigTree compatible) tree(s).
    Downloads
  • 0.1.1 0ffc437e50

    0.1.1 Stable

    malacology released this 2023-10-11 22:03:06 +08:00 | 15 commits to main since this release

    guoyi.run

    • add: branch swapping after new tech search
    Downloads
  • 0.1.0 3938a03b70

    0.1.0 Stable

    malacology released this 2023-10-10 23:29:48 +08:00 | 18 commits to main since this release

    guoyi.run

    • add: relative Bremer support

    • add: fasta nexus input function

    • add: generate winclada.ss file which can be read by winclada directly

    • add: use tree vault to save consensus tree during operation

    • polish: argument processing function

    • polish: Bremer-related can be generated faster via TBR

    • polish: sub should be re-adjusted to zero before resample

    • polish: resample count change, now rbrs 0.1 brs 0.2 jak 1 boot 2 sym 4.

    • polish: errmsg repeat is solved via goto

    • fix: OR expression

    • fix: search warning

    • fix: ntax is the number of taxa minus one, now change to the right number

    • orphan: considering the winclada.ss can be read by winclada and it contains a tree and matrix, therefore, tnt2winclada is orphaned now from version 0.1.0.

    Downloads
  • 0.0.9 0b81ca0d76

    0.0.9 Stable

    malacology released this 2023-09-17 02:47:04 +08:00 | 46 commits to main since this release

    guoyi.run

    • add: symmetric resmaple (=8), change default resmaple to 8

    • fix: empty arguments

    Downloads
  • 0.0.8 3ddaad9393

    0.0.8 Stable

    malacology released this 2023-09-14 15:47:37 +08:00 | 48 commits to main since this release

    guoyi.run

    • add: custom datatype, weighting types, K value, consensus type, resample type and prefix

    • polish: search based on ntax and weighting types

    Downloads
  • 0.0.7 5a7faee66e

    0.0.7 Stable

    malacology released this 2023-09-12 17:57:18 +08:00 | 54 commits to main since this release

    guoyi.run

    • fix: jacknifing and bootstrap scores don't map to the consensus tree

    • fix: bremer support calculation influence the consensus tree in the memory

    • polish: the CI RI and TL are not reported as tables anymore, just plain text

    Downloads