38 lines
1.5 KiB
Plaintext
38 lines
1.5 KiB
Plaintext
The staden suite of sequence analysis programs for the SUN/X11
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--------------------------------------------------------------
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The contents of this directory should be (at least):
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bin executable sequence analysis programs
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help helpfiles used by these programs
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staden.l manual page
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staden.login csh initialisations
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staden.profile sh initialisations
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tables tables used by the programs
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Installers should first print out a copy of the manual page.
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This describes the current state of the software and how to
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invoke the initialisations. The manual page should be placed
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somewhere where `man' can find it.
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The directory structure should be position independent. It's
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location, however, must be encoded in the environment
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variable $STADENROOT. This is described in the man page.
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xdap - Sequence assembly program
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--------------------------------
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This is the source directory for the dap and xdap sequence assembly
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programmes, and convert_project. As well as the sources you should
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find a makefile and a default resources file "Xdap".
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The "xdap" application can be constructed by simply typing "make xdap",
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and installed by typing "make installx" As xdap requires objects from
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the "staden" and "ted" directories, it should be made after the staden
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package proper and the trace editor have been made.
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The default X resource file "Xdap" files is found in
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$STADENROOT/tables, and the environment variable XFILESEARCHPATH is set
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in staden.login to refer to it. This file could also be placed in the
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"/usr/lib/X11/app-defaults" directory.
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