staden-lg/tables/TAGDB
2021-12-04 05:07:58 +00:00

60 lines
1.2 KiB
Text

#
# This is a tag database for xdap
#
# The syntax in BNF is:
#
# <tag_db> ::= <tag> <tag_db> | <empty>
# <tag> ::= <identifier> : <option_list> \n | <identifier> \n
# <option_list> ::= <option> : <option_list> | <option_list>
# <option> ::= <option_name> = <string>
#
# Lines starting with a # are comments and are ignored.
# Newlines can be escaped over by placing a back slash at the end of the line
#
# options description default value
# id="string" identifier for searching 1st 4 characters of identifier
# fg=colour foreground colour fg for window
# bg=colour background colour bf for window
# dt="string" default text for tag none
#
# examples:
# comment:fg=blue:dt="?"
#
# For general comments
comment: \
id="COMM": \
fg=blue: \
dt="?"
# For marking oligos
oligo: \
id="OLIG": \
bg=yellow: \
# For marking compressions
compression: \
id="COMP": \
bg=red: \
# For marking stops
stop: \
id="STOP": \
fg=white: \
bg=blue: \
# For marking repeats
repeat: \
id="REPT": \
bg=green2: \
# For marking cosmid vector
"cosmid vector" : \
id="CVEC" : \
bg=cyan
# For marking ALU sequences
"Alu segment" : \
id="ALUS" : \
bg=green