staden-lg/src/update_subclones/subclones.syntax

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YAML

Cosmid Subclone Libraries
The cosmid subclone library is a file of the following format:
<file> ::= <line> <file> |
<line> ::= <microtitre-dish-no>
<cosmid>
<size-range>
<fragmentation-method>
<vector>
<comment-list>
<opt-info>
<microtitre-dish-no> ::= <string>
<cosmid> ::= <string>
<size-range> ::= <number>..<number>
<fragmentation-method> ::= <string>
<vector> ::= <string>
<comment-list> ::= <comment> <comment-list> |
<comment> ::= ( <string> )
<opt-info> ::= <info> |
<info> ::= # <user-id> <host-id> <date>
where:
<string> ::= any series of characters terminated by white space
<number> ::= integer number
<user-id> ::= user id of person who created entry
<host-id> ::= from where entry was created
<date> ::= date the entry was created
Here (at MRC):
<microtitre-dish-no> ::= <string><letter><digit><digit>