malacology/msamarker
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generate marker sequence based on Gblocks & trim msa based on marker sequence
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Guoyi Zhang c1b7df1172 add: README
2024-05-07 12:52:23 +08:00
CMakeLists.txt add: compile project 2024-05-07 12:39:45 +08:00
gene_marker.cpp polish: same style 2024-05-07 12:39:13 +08:00
README.md add: README 2024-05-07 12:52:23 +08:00
trim_marker.cpp fix: -Wsign-compare 2024-05-07 12:38:56 +08:00

README.md

  • Author: Guoyi Zhang

  • License: GPLv2

gene_marker

Generate fasta file which m means selected position by Gblocks from Gblocks html report file.

Usage:

gene_marker <input_file> <output_file>

trim_marker

Trim the multi-sequence-alignment based on the marker which m indicates selected position.

Usage:

trim_marker <marker_fasta_file> <input_fasta_file> <output_file>