malacology
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msamarker
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generate marker sequence based on Gblocks & trim msa based on marker sequence
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README.md

  • Author: Guoyi Zhang

  • License: GPLv2

gene_marker

Generate fasta file which m means selected position by Gblocks from Gblocks html report file.

Usage:

gene_marker <input_file> <output_file>

trim_marker

Trim the multi-sequence-alignment based on the marker which m indicates selected position.

Usage:

trim_marker <marker_fasta_file> <input_fasta_file> <output_file>