TNT Script for Maximum Parsimony Analysis https://doi.org/10.5281/zenodo.8431529
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# TNT Script used by Guoyi

This scripts are followed MIT except for setk.run which belongs to Salvador Arias(Instituto Miguel Lillo, San Miguel de Tucumán, Argentina).

## Usage

- OS: Arch Linux;

- `tnt run guoyi.run file.tnt`, `file.tnt` is your data;

- Type `;` and enter;

## Options

- `trees.tre`, `bt.tre` are trees with taxaname;

- `trees_no.tre`, `bt_no.tre` are trees without taxaname which can be put into Winclada with the `file.tnt`;

- `majority` can be replaced by `nelsen`;

- `boot` can be replaced by `jack`;