TNT Script for Maximum Parsimony Analysis https://doi.org/10.5281/zenodo.8431529
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TNT Script used by Guoyi

These scripts follow MIT except for setk.run which belongs to Salvador Arias (Instituto Miguel Lillo, San Miguel de Tucumán, Argentina).

Usage

Method1

  • OS: Arch Linux;

  • tnt run guoyi.run file.tnt, file.tnt is your data;

  • Type ; and enter;

Method2

  • Replace %1 with your filename;

  • Run tnt p guoyi.run directly;

Options

  • trees.tre, bt.tre are trees with taxaname;

  • trees_no.tre, bt_no.tre are trees without taxaname which can be put into Winclada with the file.tnt;

  • majority can be replaced by nelsen;

  • boot can be replaced by jack;