# TNT Script used by Guoyi

This scripts are followed MIT except for setk.run which belongs to Salvador Arias(Instituto Miguel Lillo, San Miguel de Tucumán, Argentina).

## tnt.run

- `file.tnt` must be changed to your own file;

- `trees.tre`, `bt.tre` are trees with taxaname;

- `trees_no.tre`, `bt_no.tre` are trees without taxaname which can be put into Winclada with the `file.tnt`;

- `majority` can be replaced by `nelsen`;

- `boot` can be replaced by `jack`;

## setk_tnt.run

- `file.tnt` must be changed to your own file;

- You can find the recommended k from `setk.log` and then change in `piwe=` `tnt.run`;