36 lines
1.1 KiB
Text
36 lines
1.1 KiB
Text
dbstat update 3 Feb 94
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NAME
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dbstat - calculates amino acid frequencies in a protein
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database
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SYNOPSIS
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dbstat
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DESCRIPTION
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dbstat reads a file of one or more nucleic acid sequences
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and calculates the amino acid frequencies, both in terms of
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absolute numbers, and as a fraction of the total.
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input - The input file is the standard .wrp (Pearson) format,
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such as that produced by getob:
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>name
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; one or more comment lines (optional)
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sequence lines
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Comments begin either with semicolon (;) or right arrow (>)
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characters.
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AUTHOR
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Dr. Brian Fristensky
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Dept. of Plant Science
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University of Manitoba
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Winnipeg, MB Canada R3T 2N2
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Phone: 204-474-6085
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FAX: 204-261-5732
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frist@cc.umanitoba.ca
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REFERENCE
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Fristensky, B. (1993) Feature expressions: creating and manipulating
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sequence datasets. Nucleic Acids Research 21:5997-6003.
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