77 lines
4.0 KiB
Plaintext
Executable File
77 lines
4.0 KiB
Plaintext
Executable File
Data Arangement:
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Y
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------------------
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(X) A C G U
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------------------
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5' ==> 3'
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AX
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AY
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3' <== 5'
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(A) . . . .
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(C) . . . .
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(G) . . . .
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(U) -0.7 -0.1 -0.7 -0.1
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--------------------------------
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STACKING ENERGIES :
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Y Y Y Y
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------------------ ------------------ ------------------ ------------------
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A C G U A C G U A C G U A C G U
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------------------ ------------------ ------------------ ------------------
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5' --> 3' 5' --> 3' 5' --> 3' 5' --> 3'
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AX AX AX AX
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AY CY GY UY
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3' <-- 5' 3' <-- 5' 3' <-- 5' 3' <-- 5'
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. . . . . . . . . . . . . . . -0.9
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. . . . . . . . . . . . . . -2.1 .
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. . . . . . . . . . . . . -1.7 . -0.5
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. . . . . . . . . . . . -0.9 . -0.7 .
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Y Y Y Y
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------------------ ------------------ ------------------ ------------------
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A C G U A C G U A C G U A C G U
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------------------ ------------------ ------------------ ------------------
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5' --> 3' 5' --> 3' 5' --> 3' 5' --> 3'
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CX CX CX CX
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AY CY GY UY
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3' <-- 5' 3' <-- 5' 3' <-- 5' 3' <-- 5'
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. . . . . . . . . . . -1.8 . . . .
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. . . . . . . . . . -2.9 . . . . .
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. . . . . . . . . -2.0 . -1.5 . . . .
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. . . . . . . . -1.7 . -1.5 . . . . .
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Y Y Y Y
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------------------ ------------------ ------------------ ------------------
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A C G U A C G U A C G U A C G U
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------------------ ------------------ ------------------ ------------------
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5' --> 3' 5' --> 3' 5' --> 3' 5' --> 3'
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GX GX GX GX
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AY CY GY UY
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3' <-- 5' 3' <-- 5' 3' <-- 5' 3' <-- 5'
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. . . . . . . -2.3 . . . . . . . -0.5
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. . . . . . -3.4 . . . . . . . -1.9 .
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. . . . . -2.9 . -1.3 . . . . . -1.5 . -0.5
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. . . . -2.1 . -1.9 . . . . . -0.7 . -0.5 .
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Y Y Y Y
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------------------ ------------------ ------------------ ------------------
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A C G U A C G U A C G U A C G U
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------------------ ------------------ ------------------ ------------------
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5' --> 3' 5' --> 3' 5' --> 3' 5' --> 3'
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UX UX UX UX
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AY CY GY UY
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3' <-- 5' 3' <-- 5' 3' <-- 5' 3' <-- 5'
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. . . -1.1 . . . . . . . -0.7 . . . .
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. . -2.3 . . . . . . . -1.3 . . . . .
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. -1.8 . -0.7 . . . . . -1.5 . -0.6 . . . .
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-0.9 . -0.5 . . . . . -0.5 . -0.5 . . . . .
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