gde_linux/ZUKER/begin.dat

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MFOLD - Prediction of RNA secondary structure by free energy minimization.
- Version 2.0 : suboptimal folding with temperature dependence
- Michael Zuker and John Jaeger
- LRNA : folds linear RNA sequences
- CRNA : folds circular RNA sequences
Any research that uses these programs should cite :
M. Zuker
On Finding All Suboptimal Foldings of an RNA Molecule.
Science, 244, 48-52, (1989)
J. A. Jaeger, D. H. Turner and M. Zuker
Improved Predictions of Secondary Structures for RNA.
Proc. Natl. Acad. Sci. USA, BIOCHEMISTRY, 86, 7706-7710, (1989)
J. A. Jaeger, D. H. Turner and M. Zuker
Predicting Optimal and Suboptimal Secondary Structure for RNA.
in "Molecular Evolution: Computer Analysis of Protein and
Nucleic Acid Sequences", R. F. Doolittle ed.
Methods in Enzymology, 183, 281-306 (1989)