46 lines
1.1 KiB
Text
46 lines
1.1 KiB
Text
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clu2ig update 3 Feb 94
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NAME
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clu2ig
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SYNOPSIS
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clu2ig clustalfile > igfile
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DESCRIPTION
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Converts interleaved .aln output from Clustal V into
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sequential .ig (IntelliGenetics) format for use by MASE.
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clustalfile:
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CLUSTAL V multiple sequence alignment
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name1 AACTTTCG
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name2 ATCTTTCG
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* ******
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name1 CCTGCT
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name2 CCCGCT
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** ***
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igfile:
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;
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name1
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AACTTTCG
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CCTGCT
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:
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name2
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ATCTTTCG
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CCCGCT
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AUTHOR
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Dr. Brian Fristensky
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Dept. of Plant Science
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University of Manitoba
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Winnipeg, MB Canada R3T 2N2
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Phone: 204-474-6085
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FAX: 204-261-5732
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frist@cc.umanitoba.ca
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REFERENCE
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Fristensky, B. (1993) Feature expressions: creating and manipulating
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sequence datasets. Nucleic Acids Research 21:5997-6003.
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