diff --git a/README.md b/README.md index da68082..e491ec4 100644 --- a/README.md +++ b/README.md @@ -56,7 +56,7 @@ tnt run guoyi.run filename datatype weight K cons resample prefix, - resample should be sum of what you want - - jak=1, boot=2, relative bremer=4 i.e. jak+boot+bremer=7 (default) + - jak=1, boot=2, relative bremer=4 sym=8 i.e. jak+boot+sym+bremer=15 (default) - prefix can be empty or a string diff --git a/guoyi.run b/guoyi.run index cffd262..3609ca9 100644 --- a/guoyi.run +++ b/guoyi.run @@ -28,8 +28,8 @@ if ( (argnumber == 0) | (argnumber >7) ) quote - | mjr=majority rule, hlf=half |; quote - | str=strict (default) |; quote - | - resamp should be sum of what you want |; - quote - | jak=1, boot=2, relative bremer=4 |; - quote - | i.e. jak+boot+bremer=7 (default) |; + quote - | jak=1, boot=2, relative bremer=4 sym=8 |; + quote - | i.e. jak+boot+sym+bremer=15 (default) |; quote - | - prefix can be empty, or a string |; quote - | default is empty |; quote - \----------------------------------------------------/; @@ -37,9 +37,9 @@ if ( (argnumber == 0) | (argnumber >7) ) end /*Basic settings*/ -taxname+1000; +taxname+100; taxname=; -mxram 10240; +mxram 500; if(argnumber>=2) nstates %2; else @@ -102,7 +102,7 @@ if ((ntax>25) && (ntax < 75)) quote - | TBR Mult will be performed. |; end if (ntax>=75) -quote - | TBR Mult and Xmult will be performed. |; +quote - | Xmult will be performed. |; end if (argnumber>=5) if (eqstring [ %5 mjr ]) @@ -140,9 +140,38 @@ quote - | Bootstrap and relative bremer support |; if (%6==7) quote - | Jackknifing, bootstrap and relative bremer |; end + if (%6==8) +quote - | Symmetric resampling |; + end + if (%6==9) +quote - | Jackknifing and symmetric resampling |; + end + if (%6==10) +quote - | Bootstrap and symmetric resampling |; + end + if (%6==11) +quote - | Jackknifing, bootstrap and symmetric |; +quote - | resampling |; + end + if (%6==12) +quote - | Symmetric resampling and relative bremer |; + end + if (%6==13) +quote - | Jackknifing, symmetric resampling and |; +quote - | relative bremer |; + end + if (%6==14) +quote - | Bootstrap, symmetric resampling and |; +quote - | relative bremer |; + end + if (%6==15) +quote - | Jackknifing, bootstrap, symmetric |; +quote - | resampling and relative bremer support |; + end end if (argnumber<6) -quote - | Jackknifing, bootstrap and relative bremer |; +quote - | Jackknifing, bootstrap, symmetric |; +quote - | resampling and relative bremer support |; end quote - | will be shown on the resample.svg. |; quote - | Apomorphic characters mapping will be shown |; @@ -165,23 +194,27 @@ else end /*Search trees*/ -if(eqstring [ %3 ew ] | eqstring [ %3 iw ] ) - if (ntax<=25) - ienum; - else - mult=replic 1000 tbr hold 1000; - bbreak=tbr fill; - if (ntax>74) - sect: slack 1000; - xmult=hit 1000 noupdate replications 20 drift 10 ratchet 10 fuse 10 hold 1 keepall; +if(argnumber>2) + if(eqstring [ %3 ew ] | eqstring [ %3 iw ] ) + if (ntax<=25) + ienum; + else + if (ntax<=74) + mult=replic 1000 tbr hold 1000; + bbreak=tbr fill; + end + if (ntax>74) + sect: slack 40; + xmult=hit 50 replications 20 drift 10 ratchet 10 fuse 10 hold 10 keepall; + end end - end + end else mult=replic 1000 tbr hold 1000; bbreak=tbr fill; if (ntax>74) sect: slack 1000; - xmult=hit 1000 noupdate replications 20 drift 10 ratchet 10 fuse 10 hold 1 keepall; + xmult=hit 50 replications 20 drift 10 ratchet 10 fuse 10 hold 10 keepall; end end @@ -262,12 +295,19 @@ ttags]; /*in one line*/ /* jak+boot=3, */ /* jak+brember=5, boot+bremer=6, */ /* jak+boot+bremer=7, */ +/* sym=8, */ +/* jak+sym=9, boot+sym=10, bremer+sym=12 */ +/* jak+boot+sym=11, jak+bremer+sym=13, */ +/* boot+bremer+sym=14, */ +/* jak+sym+boot+bremer=15 */ if (argnumber<=5) /*jakknifing*/ resample jak replications 1000 from 0; /*bootstrap*/ resample boot replications 1000 from 0; + /*symmetric resampling*/ + resample sym replications 1000 from 0; /*relative bremer*/ sub 1; hold +1000; bbreak=fill; sub 3; hold +3000; bbreak=fill; @@ -275,15 +315,19 @@ if (argnumber<=5) sub 7; hold +7000; bbreak=fill; bsupport[; else - if((%6==1) | (%6==3) | (%6==5) | (%6==7)) + if((%6==1) | (%6==3) | (%6==5) | (%6==7) | (%6==9) | (%6==11) | (%6==13) | (%6==15)) resample jak replications 1000 from 0; end - if((%6==2) | (%6==3) | (%6==6) | (%6==7)) + if((%6==2) | (%6==3) | (%6==6) | (%6==7) | (%6==10) | (%6==11) | (%6==14) | (%6==15)) resample boot replications 1000 from 0; end - - if((%6==4) | (%6==5) | (%6==6) | (%6==7)) + + if((%6==8) | (%6==9) | (%6==10) | (%6==11) | (%6==12) | (%6==13) | (%6==14) | (%6==15)) + resample sym replications 1000 from 0; + end + + if((%6==4) | (%6==5) | (%6==6) | (%6==7) | (%6==12) | (%6==13) | (%6==14) | (%6==15)) sub 1; hold +1000; bbreak=fill; sub 3; hold +3000; bbreak=fill; sub 5; hold +5000; bbreak=fill; @@ -371,9 +415,38 @@ quote - | support |; quote - | jackknifing, bootstrap and |; quote - | relative bremer support |; end -else + if (%6==8) +quote - | symmetric resampling |; + end + if (%6==9) +quote - | Jackknifing and symmetric resample |; + end + if (%6==10) +quote - | Bootstrap and symmetric resample |; + end + if (%6==11) quote - | jackknifing, bootstrap and |; +quote - | symmetric resample |; + end + if (%6==12) +quote - | relative bremer support and |; +quote - | symmetric resampling |; + end + if (%6==13) +quote - | Jackknifing, symmetric resample and |; quote - | relative bremer support |; + end + if (%6==14) +quote - | bootstrap, symmetric resmaple and |; +quote - | relative bremer support |; + end + if (%6==15) +quote - | jackknifing, bootstrap, symmetric |; +quote - | resample and relative bremer support|; + end +else +quote - | jackknifing, bootstrap, symmetric |; +quote - | resample and relative bremer support|; end quote - | The file `apo.svg` contain the |;