2022-01-04 20:19:57 +08:00
|
|
|
# GoComb
|
2022-01-01 16:25:21 +08:00
|
|
|
sequence combination tool written in Golang
|
|
|
|
|
|
2022-01-04 20:16:02 +08:00
|
|
|
# Requirement
|
|
|
|
|
|
2022-01-15 19:24:09 +08:00
|
|
|
- go [for compile]
|
2022-01-04 20:16:02 +08:00
|
|
|
|
2022-01-04 20:19:57 +08:00
|
|
|
# Compile
|
2022-01-04 20:11:31 +08:00
|
|
|
```
|
|
|
|
|
git clone git@github.com:MalacoLab/gocomb.git
|
|
|
|
|
cd gocomb
|
|
|
|
|
go build
|
|
|
|
|
```
|
|
|
|
|
|
2022-01-04 20:19:57 +08:00
|
|
|
# How to use
|
2022-01-04 20:11:31 +08:00
|
|
|
|
2022-01-04 20:19:57 +08:00
|
|
|
## Convert fas to nex
|
2022-01-04 20:11:31 +08:00
|
|
|
```
|
|
|
|
|
./gocomb -o output.nex import.fas
|
|
|
|
|
./gocomb import.fas
|
|
|
|
|
```
|
|
|
|
|
|
2022-01-04 20:19:57 +08:00
|
|
|
## Combine serveral fas to single nex
|
2022-01-01 16:25:21 +08:00
|
|
|
|
|
|
|
|
```
|
2022-01-04 20:11:31 +08:00
|
|
|
./gocomb import1.fas import2.fas
|
|
|
|
|
./gocomb -o export.nex import1.fas import2.fas
|
2022-01-01 16:25:21 +08:00
|
|
|
```
|
