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fix: the formatting

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kuoi 2024-07-03 11:06:49 +10:00
parent 34669b7837
commit fdc588efc7
1 changed files with 5 additions and 5 deletions
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10
RGBEPP.sh
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@ -46,16 +46,16 @@ while true; do
*) ARG_F=$2; shift 2 ;; *) ARG_F=$2; shift 2 ;;
esac ;; esac ;;
-h|--help) -h|--help)
echo -e "\t\t\t\t\tRGB EPP\n\t\t\t\t\tReference Genome based Exon Phylogeny Pipeline\n \ echo -e "\t\t\t\t\t\t\tRGB EPP\n\t\t\t\t\tReference Genome based Exon Phylogeny Pipeline\n \
Version: $pkgver\n \ Version: $pkgver\n \
License: GPL-3.0-only\n \ License: GPL-3.0-only\n \
Author: Guoyi Zhang\n \ Author: Guoyi Zhang\n \
-c\t--contigs\tcontings type: scaffolds or contigs\n \ -c\t--contigs\tcontings type: scaffolds or contigs\n \
-g\t--genes\tgene file path\n \ -g\t--genes\t\tgene file path\n \
-f\t--functions\tfunctions type (optional): all clean \n \ -f\t--functions\tfunctions type (optional): all clean \n \
\t assembly fasta map pre split merge align\n \ \t \t\tassembly fasta map pre split merge align\n \
-h\t--help\thelp: show this information\n \ -h\t--help\t\thelp: show this information\n \
-l\t--list\tlist file path\n \ -l\t--list\t\tlist file path\n \
-m\t--memory\tmemory settings (optional, default 16 GB)\n \ -m\t--memory\tmemory settings (optional, default 16 GB)\n \
-r\t--reference\treference genome path\n \ -r\t--reference\treference genome path\n \
-t\t--threads\tthreads setting (optional, default 8 threads)\n \ -t\t--threads\tthreads setting (optional, default 8 threads)\n \