fix: the formatting
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1 changed files with 5 additions and 5 deletions
10
RGBEPP.sh
10
RGBEPP.sh
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@ -46,16 +46,16 @@ while true; do
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*) ARG_F=$2; shift 2 ;;
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esac ;;
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-h|--help)
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echo -e "\t\t\t\t\tRGB EPP\n\t\t\t\t\tReference Genome based Exon Phylogeny Pipeline\n \
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echo -e "\t\t\t\t\t\t\tRGB EPP\n\t\t\t\t\tReference Genome based Exon Phylogeny Pipeline\n \
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Version: $pkgver\n \
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License: GPL-3.0-only\n \
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Author: Guoyi Zhang\n \
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-c\t--contigs\tcontings type: scaffolds or contigs\n \
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-g\t--genes\tgene file path\n \
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-g\t--genes\t\tgene file path\n \
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-f\t--functions\tfunctions type (optional): all clean \n \
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\t assembly fasta map pre split merge align\n \
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-h\t--help\thelp: show this information\n \
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-l\t--list\tlist file path\n \
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\t \t\tassembly fasta map pre split merge align\n \
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-h\t--help\t\thelp: show this information\n \
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-l\t--list\t\tlist file path\n \
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-m\t--memory\tmemory settings (optional, default 16 GB)\n \
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-r\t--reference\treference genome path\n \
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-t\t--threads\tthreads setting (optional, default 8 threads)\n \
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