malacology/RGBEPP
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fix: rm something meaningless

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kuoi 2024-12-09 17:25:21 +11:00
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README.md
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@ -101,9 +101,6 @@ grep '>' Reference.fasta | sed "s@>@@g" > genes
### RGBEPP functions ### RGBEPP functions
map postmap varcall consen codon align trim
- Function clean: Quality control + trimming (fastp) - Function clean: Quality control + trimming (fastp)
- Function assembly: de novo assembly (spades) - Function assembly: de novo assembly (spades)
- Function map: local nucleic acids alignment search against amino acids subject sequence (diamond, sortdiamond), mapping raw reads to its scaffolds sequences (bowtie2) - Function map: local nucleic acids alignment search against amino acids subject sequence (diamond, sortdiamond), mapping raw reads to its scaffolds sequences (bowtie2)