malacology/RGBEPP
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polish: rename the pipleine

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kuoi 2024-07-03 11:01:43 +10:00
parent 3a761cbe2a
commit eddec7a07c
1 changed files with 2 additions and 2 deletions
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4
batch.sh → RGBEPP.sh
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@ -21,7 +21,7 @@ HELP=false
### Get some arrays ### Get some arrays
ARGS=$(getopt -o c:,f:,g:,h,l:,m:,r:,t: --long contigs:,genes:,functions:,help,list:,memory:,reference:,threads: -n 'batch.sh' -- "$@") ARGS=$(getopt -o c:,f:,g:,h,l:,m:,r:,t: --long contigs:,genes:,functions:,help,list:,memory:,reference:,threads: -n 'RGBEPP.sh' -- "$@")
if [ $? != 0 ]; then if [ $? != 0 ]; then
echo "Failed to parse options." >&2 echo "Failed to parse options." >&2
exit 1 exit 1
@ -46,7 +46,7 @@ while true; do
*) ARG_F=$2; shift 2 ;; *) ARG_F=$2; shift 2 ;;
esac ;; esac ;;
-h|--help) -h|--help)
echo -e "\t\t\t\t\tExon Phylogeny Pipeline\n \ echo -e "\t\t\t\t\tRGB EPP\n\t\t\t\t\tReference Genome based Exon Phylogeny Pipeline\n \
Version: $pkgver\n \ Version: $pkgver\n \
License: GPL-3.0-only\n \ License: GPL-3.0-only\n \
Author: Guoyi Zhang\n \ Author: Guoyi Zhang\n \