malacology/RGBEPP
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

fix: align array issue

Browse source
This commit is contained in:
kuoi 2024-07-03 12:54:51 +10:00
parent 3fbb8b0d98
commit d06242d91f
1 changed files with 1 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
RGBEPP.sh
View file

@ -255,7 +255,7 @@ if [ "$ARG_F" = "all" ] || [ "$ARG_F" = "align" ]; then
cd $DirMerge
for (( i=0; i<$length_gn; i++ ))
do
java -jar $PathMacse -prog alignSequences -seq ${genes}.fasta -out_AA ../$DirAlign/AA/$genes.fasta -out_NT ../$DirAlign/NT/$genes.fasta
java -jar $PathMacse -prog alignSequences -seq ${genes[$i]}.fasta -out_AA ../$DirAlign/AA/${genes[$i]}.fasta -out_NT ../$DirAlign/NT/${genes[$i]}.fasta
done
cd -